From the "Ad-Detective Parameters" window (Ad-Detective-->Set Ad-Detective Parameters...) on the Common Parameters tab you can set "Automatically Cut Detected Scenes". I am not an expert at VBS scripts, I just happened to use what was provided by the great developers.
One would have also to add lines in the vbs script to save the video in one of the supported output formats. If anyone could help with this that would be great.
The problem is that from my personal experience the default scan does not seem to provide accurate scene markers in some cases. The source files from different channels and even different video formats, bitrates, etc. seem to produce the same result. For example, SCIFI channel seems to use very small transitions and CBS uses very long transitions between commercials and the show. The main problem is that there is no way in the COM interface for VideoReDo to train the Ad-Detective automatically. Second even if it happened to accurately cut something right for 10 videos in a row, its not guaranteed to cut everytime.
The longest point of the cutting process is the initial Ad-Scan. Then one marks the cut points and then saves the video. That batch file has saved me so much time.